If you’ve ever wished for a breakfast treat that’s both delicious and ready to go whenever hunger strikes, these Freezer-Friendly Ham, Egg, and Cheese Bagel Bombs Recipe is exactly what you need. Imagine soft, fluffy bagels bursting with warm, savory eggs, smoky ham, and melty cheese—all wrapped up and perfectly portable. Not only are these bagel bombs scrumptiously satisfying, but they also freeze beautifully, making them a lifesaver for busy mornings or for feeding a crowd with minimal fuss. Once you try this recipe, your breakfast routine will never be the same!

Ingredients You’ll Need
Getting started with this Freezer-Friendly Ham, Egg, and Cheese Bagel Bombs Recipe is a breeze thanks to its simple, wholesome ingredients. Each one plays a key role—from the soft dough that creates a pillowy exterior to the savory fillings that bring everything together.
- Refrigerated Pizza Dough: The foundation for your bagel bombs, offering convenience and a soft, chewy texture.
- Whole Eggs: Essential for that fluffy, protein-packed filling; feel free to substitute egg whites if preferred.
- Diced Ham: Adds a smoky, savory bite, but turkey or chicken breast work wonderfully as leaner alternatives.
- Shredded Allegro Cheese: Melts perfectly and creates gooey goodness—cheddar or mozzarella are great substitutes.
- Salt and Pepper: Simple seasonings that enhance every flavor in the filling.
- Bagel Seasoning: A flavorful mix of poppy seeds, sesame seeds, and garlic powder that gives a classic bagel crust punch.
- Honey: Optional, but a splash in the boiling water helps the dough rise beautifully and adds subtle sweetness.
How to Make Freezer-Friendly Ham, Egg, and Cheese Bagel Bombs Recipe
Step 1: Prepare the Dough
Start by thawing your refrigerated pizza dough so it’s soft and pliable. Divide the dough into eight equal pieces. Rolling each piece into a smooth ball, cover them with a clean kitchen towel and let them rest for 20 minutes. This resting period is key—it allows the dough to relax and rise slightly, resulting in a wonderfully fluffy bagel bomb crust.
Step 2: Cook the Filling
While the dough is resting, whisk together the eggs with a pinch of salt and pepper. Gently scramble them in a pan over medium heat until they’re fluffy just like you want. It’s important to avoid overcooking; soft scrambled eggs lend a creamy texture that perfectly complements the other fillings. Set them aside to cool slightly.
Step 3: Prepare Boiling Water with Honey
Fill a large pot with water and bring it to a boil. Adding a tablespoon of honey is a little secret that promotes a nice rise and subtle sweetness in your bagel bomb’s crust. Once boiling, you’re ready for the next step.
Step 4: Assemble the Bagel Bombs
Flatten each dough ball into a circle about the size of your palm. Spoon a generous amount of scrambled eggs, diced ham, and shredded cheese right into the center. Now, carefully bring the edges up and pinch them closed so all those delicious fillings are safely tucked inside. Sealing well is key to prevent any leaks during boiling and baking.
Step 5: Boil the Bagel Bombs
Drop the sealed bagel bombs gently into the boiling honey water for 30 seconds to one minute. This step is what gives bagels their classic chewy crust, so don’t skip it! Use a slotted spoon to remove them and place them on a lined baking sheet to drain.
Step 6: Bake to Golden Perfection
Sprinkle each boiled bagel bomb generously with your bagel seasoning mix. Bake them in a preheated oven at 425 degrees Fahrenheit for about 20 minutes or until the tops turn a beautiful golden brown. That golden color means your bagel bombs are perfectly baked with a crisp and flavorful crust.
Step 7: Cool and Freeze
Once baked, it’s crucial to let your bagel bombs cool completely. Wrapping warm bagels traps moisture and could lead to sogginess. When cool, wrap each bomb individually with plastic wrap or place them into a freezer-safe bag. This is the magic moment where these delicious bagel bombs become your best freezer finds, ready to be enjoyed anytime.
How to Serve Freezer-Friendly Ham, Egg, and Cheese Bagel Bombs Recipe

Garnishes
To elevate the experience, sprinkle a little fresh chive or parsley on top after reheating—they add a pop of color and a mild oniony freshness that pairs beautifully with ham and cheese.
Side Dishes
These bagel bombs are hearty on their own, but a light side of fresh fruit or a crisp green salad makes a delightful balance, especially if you’re serving them for brunch or lunch. A dollop of sour cream or a small cup of salsa on the side adds a zesty twist you won’t forget.
Creative Ways to Present
Slice these bagel bombs in half and present them on a charcuterie board alongside pickles, olives, and assorted cheeses for a fun party platter. Or stack mini versions on skewers for a playful finger food twist—perfect for casual get-togethers!
Make Ahead and Storage
Storing Leftovers
If you have any leftover bagel bombs (and trust me, you might!), store them in an airtight container in the refrigerator for up to three days. Reheating gently will bring back their fresh-from-the-oven charm without drying them out.
Freezing
This Freezer-Friendly Ham, Egg, and Cheese Bagel Bombs Recipe really shines because it freezes so well. Wrapped securely, they can stay in the freezer for up to two months without any loss in taste or texture, making them your perfect make-ahead breakfast or snack option.
Reheating
To reheat, unwrap the bagel bombs and warm them in a 350-degree Fahrenheit oven for about 10 to 15 minutes until heated through and the crust is crisp again. You can also use a microwave for a quick warm-up, but the oven method keeps the crust beautifully chewy and prevents sogginess.
FAQs
Can I use homemade dough instead of refrigerated pizza dough?
Absolutely! Homemade dough adds a personal touch and can be tailored to your taste, but refrigerated pizza dough offers convenience without sacrificing texture.
Is it possible to make these vegetarian?
Yes, simply omit the ham and add veggies like sautéed mushrooms or spinach to keep the filling flavorful and satisfying.
Can I make these bagel bombs dairy-free?
Definitely. Use a dairy-free cheese substitute or skip the cheese to accommodate dietary preferences without losing much on taste.
How long do I need to boil the bagel bombs?
About 30 seconds to one minute is perfect. Boiling too long can make the dough soggy, while less time won’t develop that signature bagel crust.
What’s the best way to thaw frozen bagel bombs?
Thaw them overnight in the refrigerator for the best texture, or if in a hurry, leave them at room temperature for an hour before reheating.
Final Thoughts
Making these Freezer-Friendly Ham, Egg, and Cheese Bagel Bombs Recipe means inviting ease and flavor into your kitchen. They’re a perfect blend of tender dough and savory filling ready to brighten up any morning or snack time. Trust me, once you’ve made these, they’ll become a treasured staple in your freezer and a favorite way to start your day with a smile. Give them a try—you’ll love how effortlessly they bring comfort and joy to your table!
Print
Freezer-Friendly Ham, Egg, and Cheese Bagel Bombs Recipe
- Prep Time: 20 minutes
- Cook Time: 40 minutes
- Total Time: 1 hour
- Yield: 8 servings
- Category: Breakfast
- Method: Baking
- Cuisine: American
Description
These Freezer Friendly Ham, Egg, and Cheese Bagel Bombs are a perfect make-ahead breakfast or snack option. Soft pizza dough envelopes fluffy scrambled eggs, savory diced ham, and melted cheese, with a quick boil and bake technique that gives them a classic bagel texture topped with signature bagel seasoning. They’re easy to prep, freezer-friendly, and deliciously satisfying any time of day.
Ingredients
Dough
- 1 package Refrigerated Pizza Dough (can also use homemade)
Filling
- 8 whole Eggs (can swap with egg whites for lighter option)
- 1 cup Diced Ham (alternatively turkey or chicken for leaner choice)
- 1 cup Shredded Allegro Cheese (or cheddar, mozzarella, or any melting cheese)
- Salt, to taste
- Pepper, to taste
Toppings
- Bagel Seasoning (poppy seeds, sesame seeds, garlic powder mix), to taste
Additional
- 1 tablespoon Honey (optional for boiling water for added rise and flavor)
Instructions
- Prepare Dough: Thaw refrigerated pizza dough and divide into 8 equal pieces. Roll each into a ball, cover with kitchen towel, and let rise for 20 minutes to develop a fluffy texture.
- Scramble Eggs: Whisk eggs with a pinch of salt and pepper. Gently scramble in a pan over medium heat until fluffy. Set aside to cool slightly.
- Boil Water: Bring a large pot of water to a boil and add honey for extra rise and flavor.
- Fill Dough: Flatten each dough ball into a circle. Spoon a portion of scrambled eggs, diced ham, and shredded cheese into the center. Carefully fold and seal the edges to enclose the filling completely.
- Boil Bagel Bombs: Drop each filled bagel bomb into boiling water for 30 seconds to 1 minute. Remove using a slotted spoon and allow them to drain.
- Bake: Place bagel bombs on a lined baking sheet. Sprinkle bagel seasoning on top. Bake in a preheated oven at 425°F (220°C) for 20 minutes or until golden brown.
- Cool and Store: Let the bagel bombs cool completely. Wrap individually in plastic wrap or place in a freezer-safe bag for freezing.
Notes
- Use egg whites instead of whole eggs for a lighter, lower-fat option.
- You can substitute diced turkey or chicken for ham to make it leaner.
- Make your own bagel seasoning by mixing poppy seeds, sesame seeds, and garlic powder if unavailable pre-made.
- Boiling the dough before baking gives the bagel bomb a chewy, authentic bagel crust.
- Wrap cooled bagel bombs tightly for freezer storage and reheat them by baking or microwaving.

